[gmx-developers] lipid-monolayer simulation.

[vasudevan at iit.edu]

hi
I am trying to simulate a lipid monolayer at the air/water interface. The
simulation cell is periodic in the x and the y directions. In the z direction,
the distance between the wall and the periodic image of the lipid tails
is arbitaraily chosen. I want to apply a wall potential so that it disallows
the diffusion of water into vaccum in the opposite direction (-z direction).
Is it possible to do this using gromacs3.0? If yes, then i would appreciate
if you could let me know how to do it.

Thanking you for your earliest attention.

Sheeja Vasudevan
Research Associate, BCPS
Illinois Institute of Technology
Chicago, IL 60616
USA