[gmx-developers] pme.c error in the CVS code ...

[Berk Hess]

X.Periole wrote:

>
> Including change the error ... so I decide to get red of
> pme.c and pppm.c and then reconfigure and compile only mdrun.
> then I got the message :
>
> mpicc -DHAVE_CONFIG_H -I. -I. -I../../src -I/usr/X11R6/include  
> -I../../include -DGMXLIBDIR=\"/data1/periole/GROCVS2//share/top\"   
> -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused 
> -malign-double -funroll-all-loops -c `test -f 'genalg.c' || echo 
> './'`genalg.c
> make[1]: *** No rule to make target `../mdlib/libmd_mpi.la', needed by 
> `mdrun'.  Stop.
> make[1]: Leaving directory 
> `/automount/direct/data1/periole/GROCVS2/gmx/src/kernel'

This seems to indicate you did not compile the mdlib library.

> make: warning:  Clock skew detected.  Your build may be incomplete.
>
This is usually caused by nfs access of a disk on another machine
which clock is not synchronized with the clock of the machine you are 
compiling on.
If you have done make clean it should be ok though.

Berk.