[gmx-developers] random xtc access in gmx-3.3
Guillem Portella
gportel at gwdg.de
Fri Nov 4 17:06:30 CET 2005
Hi all!
I'm interested in including the random xtc access in my g_tools. So far, this
is the sequence of functions I used to read the data I need:
After reading pdb and initialising t_atoms,
infile1 =open_xtc(fnms[0], "r");
infile2 =open_xtc(fnms[1], "r");
Because I read two xtc files at a time. Then I
read_first_xtc(infile1,.....);
read_first_xtc(infile2,......);
Then I do the skipping 'by hand', this is, not setting PCA_CAN_TIME
but defining them like in trjcat. The skipping is done using
read_next_xtc(infile1,....);
read_next_xtc(infile2,....);
Now, I have been looking at several g_tools, and it seems to me that this
direct access is done in read_next_frame and friends. But those functions are
just defined by one single xtc file, imho.
Are there any routines able to do the same but with multiple xtc, using
fnms[ ] for example?
Thanks in advanced,
Guillem
***************************************************************
Guillem Portella
Computational biomolecular dynamics group at the
Max Planck Institute for Biophysical Chemistry
Am Fassberg 11
D-37077 Goettingen -- Germany --
phone: ++49-551-2012309
fax: ++49-551-2012302
Email: gportel at gwdg.de
webpage: www.mpibpc.mpg.de/abteilungen/073/gportel/index.php
***************************************************************
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