[gmx-developers] gmx CVS compile error

David spoel at xray.bmc.uu.se
Wed Sep 14 18:36:04 CEST 2005


On Wed, 2005-09-14 at 17:48 +0200, Martin Dahlberg wrote:
> Hello,
> 
> Trying to compile from the CVS, downloaded today (14th Sept. 2005).
> After bootstrapping and configure (--enable-float) I try to make but get
> this error:
> 
> cc -DHAVE_CONFIG_H -I. -I. -I../../src -I/usr/X11R6/include
> -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3
> -fomit-frame-pointer -finline-functions -Wall -Wno-unused -malign-double
> -funroll-all-loops -MT pme.lo -MD -MP -MF .deps/pme.Tpo -c pme.c -o pme.o
> pme.c: In function `solve_pme':
> pme.c:633: warning: dereferencing type-punned pointer will break
> strict-aliasing rules
> pme.c: In function `do_pme':
> pme.c:1732: warning: implicit declaration of function `MPI_Barrier'
> pme.c:1732: error: `MPI_COMM_WORLD' undeclared (first use in this function)
> pme.c:1732: error: (Each undeclared identifier is reported only once
> pme.c:1732: error: for each function it appears in.)
> make[3]: *** [pme.lo] Error 1
> /.../
> 
> I have previously compiled the 3.3_beta_20050202 from CVS without problems.
Please try the 3.3 beta tarball instead, Erik posted the link a couple
of days ago. The current CVS is in great turmoil as we prepare it for
4.0.

If you want to use the 3.3 beta from CVS  use
cvs co -j release-3-3-patches gmx


> 
> Ideas?
> 
> Best regards,
> 
> Martin Dahlberg
> Division of Physical Chemistry
> Stockholm University
> 
> 
> 
> 
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-- 
David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,          75124 Uppsala, Sweden
phone:  46 18 471 4205          fax: 46 18 511 755
spoel at xray.bmc.uu.se    spoel at gromacs.org   http://xray.bmc.uu.se/~spoel
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