[gmx-developers] g_desort
Chris Neale
chris.neale at utoronto.ca
Sun Jul 8 03:35:14 CEST 2007
While logged in, From this site:
http://www.gromacs.org/component/option,com_docman/task,upload/Itemid,26/step,2/method,http/
Message:
Error uploading. - File type "tar.bz" not permitted
I also get similar messages for .tar .tar.gz and .c files
David van der Spoel wrote:
> chris.neale at utoronto.ca wrote:
>> I now have a well tested desorting program + methodology. It means
>> that I can scale to 100% on 4cpus and I have been using -shuffle
>> -sort for all my parallel runs for many months now. Basically it is
>> the same one that I posted to the users list a while ago. Is it
>> useful for me to develop good comments for g_desort and upload to
>> users contributions so that it can go into a future gromacs release
>> or is this all going to be useless in gromacs4?
> as a matter of fact, yes it wil be. sorting is inherent in domain
> decomposition, but Berk has also implemented in on single processors
> with significant speedup. Of course the output files are now in the
> same order as the input file, so there will not be any need for
> desorting. That said, it could still be useful for 3.3 users.
>
>>
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