[gmx-developers] Compilers

Justin A. Lemkul jalemkul at vt.edu
Tue Sep 16 03:05:48 CEST 2008


According to the source code download site:

"WARNING: do not use the gcc 4.1.x set of compilers. They are broken. These 
compilers come with recent Linux distrubutions like Fedora 5/6 etc."

I can attest that gcc 4.0.1 seems to have generated no problems for me. 
Anything later than that is suspect, as evidenced by strange behavior documented 
on the users list.

-Justin

Jim Kress wrote:
> I recall seeing a notice that v4 of gcc gf were not to be used to compile
> and link gromacs because the compilers were "broken".  Is that still the
> case?  I can't find that notice on the website right now.
> 
> Jim
> 
> 
>> -----Original Message-----
>> From: gmx-developers-bounces at gromacs.org 
>> [mailto:gmx-developers-bounces at gromacs.org] On Behalf Of 
>> gmx-developers-request at gromacs.org
>> Sent: Monday, September 15, 2008 6:00 AM
>> To: gmx-developers at gromacs.org
>> Subject: gmx-developers Digest, Vol 53, Issue 11
>>
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>> Today's Topics:
>>
>>    1. Denied access to CVS instructions (Jim Kress)
>>    2. Re: Denied access to CVS instructions (David van der Spoel)
>>
>>
>> ----------------------------------------------------------------------
>>
>> Message: 1
>> Date: Sun, 14 Sep 2008 12:05:13 -0400
>> From: "Jim Kress" <ccl_nospam at kressworks.com>
>> Subject: [gmx-developers] Denied access to CVS instructions
>> To: <gmx-developers at gromacs.org>
>> Message-ID: <008b01c91683$ac0279a0$1401a8c0 at inspiron9100>
>> Content-Type: text/plain;	charset="us-ascii"
>>
>> "To do development with the GROMACS libraries you also need 
>> the corresponding devel packages. In case you are interested 
>> in read-only access to the CVS repository you can check these 
>> instructions. "
>>
>> After logon with my gromacs account and then when I click on 
>> the "these instructions" link, I receive an error message 
>> stating "You are not authorised to view this resource."  How 
>> do I get past this and get access to
>> v4 on the CVS tree?
>>
>> Thanks.
>>
>> Jim Kress
>>
>>
>>
>> ------------------------------
>>
>> Message: 2
>> Date: Sun, 14 Sep 2008 20:14:13 +0200
>> From: David van der Spoel <spoel at xray.bmc.uu.se>
>> Subject: Re: [gmx-developers] Denied access to CVS instructions
>> To: Discussion list for GROMACS development
>> 	<gmx-developers at gromacs.org>
>> Message-ID: <48CD5475.5040807 at xray.bmc.uu.se>
>> Content-Type: text/plain; charset=ISO-8859-1; format=flowed
>>
>> Jim Kress wrote:
>>> "To do development with the GROMACS libraries you also need the 
>>> corresponding devel packages. In case you are interested in 
>> read-only 
>>> access to the CVS repository you can check these instructions. "
>>>
>>> After logon with my gromacs account and then when I click on the 
>>> "these instructions" link, I receive an error message 
>> stating "You are 
>>> not authorised to view this resource."  How do I get past 
>> this and get 
>>> access to
>>> v4 on the CVS tree?
>> Checkout:
>>
>> http://wiki.gromacs.org/index.php/CVS_HowTo
>>> Thanks.
>>>
>>> Jim Kress
>>>
>>> _______________________________________________
>>> gmx-developers mailing list
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>>> Please don't post (un)subscribe requests to the list. Use the www 
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>>
>> --
>> David van der Spoel, Ph.D., Professor of Biology Molec. 
>> Biophys. group, Dept. of Cell & Molec. Biol., Uppsala University.
>> Box 596, 75124 Uppsala, Sweden. Phone:	+46184714205. 
>> Fax: +4618511755.
>> spoel at xray.bmc.uu.se	spoel at gromacs.org   http://folding.bmc.uu.se
>>
>>
>> ------------------------------
>>
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>>
>> End of gmx-developers Digest, Vol 53, Issue 11
>> **********************************************
> 
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-- 
========================================

Justin A. Lemkul
Graduate Research Assistant
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

========================================



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