[gmx-developers] gromacs on opensolaris - compiles but does not really run

Karsten Meyer zifsocket at gmx.de
Mon Aug 31 09:18:13 CEST 2009


-------- Original-Nachricht --------
> Datum: Mon, 31 Aug 2009 12:05:50 +1000
> Von: Mark Abraham <Mark.Abraham at anu.edu.au>
> An: Discussion list for GROMACS development <gmx-developers at gromacs.org>
> Betreff: Re: [gmx-developers] gromacs on opensolaris - compiles but does not	really run

> Karsten Meyer wrote:
[...]

> > 
> > -------------------------------------------------------
> > Program mdrun, VERSION 4.0.5
> > Source code file: force.c, line: 1057
> > 
> > Fatal error:
> > Only triclinic boxes with the first vector parallel to the x-axis and
> the second vector in the xy-plane are supported.
> > -------------------------------------------------------
> 
> The most likely cause for this problem is an incorrectly formatted 
> coordinate file supplied to grompp. Perhaps you need to find a more 
> reliable source of inputs, since a successful test will require 
> well-conditioned input. Possibilities include the GROMACS test set, 
> GROMACS benchmark set or some tutorial material. Google is your friend.
> 
> Mark
> 

Hi Mark,

it's not only the demo stuff the comes with gromacs' source tree, some other "input files" also produce this error. Does gromacs need special GNU stuff, for example flex that in case of missing generates such effects ?



Hi all,

does anyone of you successfully run gromacs on (open) solaris ?
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