[gmx-developers] g_hbond h-bond-analysis

[Anton Feenstra]

Erik Marklund wrote:
> Anton Feenstra skrev:
>> Emanuel Peter wrote:
>>> Does the tool g_hbond with its option -hbn then show a list of all
>>> stored hbonds per frame or does it just show a list of hbonds that
>>> existed in the last frame?
>>
>> A list of all hbonds per frame.
>>
>>
> No, that's not entirely true. There's no frame-specific information in 
> that file. The list contains all hbonds that
> ever existed at any point in the analyzed part of the trajectory, not 
> per frame. That's why its size matches the y-dimension of the hbm-file.

Yes, you're right. I was still thinking about the hbmap (-hbm, the 
difference with -hbn is only a few pixels...). Sorry about the confusion.


-- 
Groetjes,

Anton
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|  _   _  ___,| K. Anton Feenstra                                     |
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