[gmx-developers] Single Point Energy Calculation

Ilya Chorny ichorny at gmail.com
Wed Jul 15 05:05:14 CEST 2009


Can one call mdrun within analysis code without doing a system call?
Ilya


On Tue, Jul 14, 2009 at 7:49 PM, Mark Abraham <Mark.Abraham at anu.edu.au>wrote:

> XAvier Periole wrote:
>
>> I think the best is to call mdrun using nstep = 0
>>
>
> ... and an EM integrator.
>
> Mark
>
>
>  Hi,
>>>
>>> I want to write an analysis script that calculates a single point energy
>>> without invoking mdrun. Since, the tpr file contains all the FF and topology
>>> information, is there a function that I can pass the TPR information to that
>>> will return the total PE of the system?
>>>
>>> Thanks,
>>>
>>> Ilya
>>>
>>>
>>> --
>>> Ilya Chorny Ph.D.
>>>
>>> _______________________________________________
>>> gmx-developers mailing list
>>> gmx-developers at gromacs.org
>>> http://lists.gromacs.org/mailman/listinfo/gmx-developers
>>> Please don't post (un)subscribe requests to the list. Use the
>>> www interface or send it to gmx-developers-request at gromacs.org.
>>>
>>
>> _______________________________________________
>> gmx-developers mailing list
>> gmx-developers at gromacs.org
>> http://lists.gromacs.org/mailman/listinfo/gmx-developers
>> Please don't post (un)subscribe requests to the list. Use thewww interface
>> or send it to gmx-developers-request at gromacs.org.
>>
>>  _______________________________________________
> gmx-developers mailing list
> gmx-developers at gromacs.org
> http://lists.gromacs.org/mailman/listinfo/gmx-developers
> Please don't post (un)subscribe requests to the list. Use the www interface
> or send it to gmx-developers-request at gromacs.org.
>



-- 
Ilya Chorny Ph.D.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-developers/attachments/20090714/39daf978/attachment.html>


More information about the gromacs.org_gmx-developers mailing list