[gmx-developers] Amid topology typo in ffG53a6.rtp

David van der Spoel spoel at xray.bmc.uu.se
Thu Jun 18 14:32:35 CEST 2009


Rossen Apostolov wrote:
> Hi,
> 
> I haven't updated the guide, it was written for the test platform and
> the info will be split on the other pages. The name of the server and
> the repository are different. You can get the source by running:
> 
> # git clone git://git.gromacs.org/gromacs.git

There are still references to gromacs.cbr.su.se on the web page. Seems 
like Erik copied some stuff in a hurry. Probably using his phone :).
> 
> Refer to http://www.gromacs.org/Developers/Git/Basic_Git_Usage for a
> list of repositories.
> 
> Regards,
> Rossen
> 
> Alexey Shvetsov wrote:
>> Hi,
>>
>> Seems yes =) ga_30 better fit to this atoms.
>>
>> PS am I right that gromacs migrating to git? i didnt see changes to
>> ffG53a6.rtp in cvs.
>> I tryed clone git as described
>> http://www.gromacs.org/Developers/Git/Gromacs_git_repository
>> but this seems not working currently
>> alexxy at quad ~/src $ git clone git://gromacs.cbr.su.se/gmx-src.git
>> Initialized empty Git repository in /home/alexxy/src/gmx-src/.git/
>> fatal: The remote end hung up unexpectedly
>> 2009/6/18 Berk Hess <hess at cbr.su.se>
>>   
>>> Hi,
>>>
>>> I think it should be ga_30 iso ga_22 though.
>>>
>>> Thanks again,
>>>
>>> Berk
>>>
>>> Alexey Shvetsov wrote:
>>>     
>>>> Ok =)
>>>> Seems i found missing angle deffinition in ACE topology
>>>>
>>>> 2009/6/18 Berk Hess <hess at cbr.su.se <mailto:hess at cbr.su.se>>:
>>>>       
>>>>> Hi,
>>>>>
>>>>> This was also mailed a week ago (I think to gmx-users).
>>>>> I have already fixed it.
>>>>>
>>>>> Thanks anyway,
>>>>>
>>>>> Berk
>>>>>
>>>>> Alexey Shvetsov wrote:
>>>>>         
>>>>>> Hi all!
>>>>>>
>>>>>> Seems i found a bug in amid (NH2) capping group topology.
>>>>>> patch attached =)
>>>>>>
>>>>>>
>>>>>>
>>>>>>           
>>>> ------------------------------------------------------------------------
>>>>       
>>>>>> _______________________________________________
>>>>>> gmx-developers mailing list
>>>>>> gmx-developers at gromacs.org <mailto:gmx-developers at gromacs.org>
>>>>>> http://lists.gromacs.org/mailman/listinfo/gmx-developers
>>>>>> Please don't post (un)subscribe requests to the list. Use the
>>>>>> www interface or send it to gmx-developers-request at gromacs.org
>>>>>>           
>>>> <mailto:gmx-developers-request at gromacs.org>.
>>>>       
>>>>> _______________________________________________
>>>>> gmx-developers mailing list
>>>>> gmx-developers at gromacs.org <mailto:gmx-developers at gromacs.org>
>>>>> http://lists.gromacs.org/mailman/listinfo/gmx-developers
>>>>> Please don't post (un)subscribe requests to the list. Use the
>>>>> www interface or send it to gmx-developers-request at gromacs.org
>>>>>         
>>>> <mailto:gmx-developers-request at gromacs.org>.
>>>>       
>>>>
>>>> --
>>>> Alexey 'Alexxy' Shvetsov
>>>> Gentoo Linux Dev
>>>>
>>>> Mail to
>>>>      alexxyum at gmail.com <mailto:alexxyum at gmail.com>
>>>>      alexxy at gentoo.ru <mailto:alexxy at gentoo.ru>
>>>>      alexxy at omrb.pnpi.spb.ru <mailto:alexxy at omrb.pnpi.spb.ru>
>>>>
>>>> ------------------------------------------------------------------------
>>>>
>>>> _______________________________________________
>>>> gmx-developers mailing list
>>>> gmx-developers at gromacs.org
>>>> http://lists.gromacs.org/mailman/listinfo/gmx-developers
>>>> Please don't post (un)subscribe requests to the list. Use the
>>>> www interface or send it to gmx-developers-request at gromacs.org.
>>>>       
>>> _______________________________________________
>>> gmx-developers mailing list
>>> gmx-developers at gromacs.org
>>> http://lists.gromacs.org/mailman/listinfo/gmx-developers
>>> Please don't post (un)subscribe requests to the list. Use the
>>> www interface or send it to gmx-developers-request at gromacs.org.
>>>     
>>
>> --
>> Alexey 'Alexxy' Shvetsov
>> Gentoo Linux Dev
>> Mail to
>>       alexxyum at gmail.com
>>       alexxy at gentoo.ru
>>       alexxy at omrb.pnpi.spb.ru
>> _______________________________________________
>> gmx-developers mailing list
>> gmx-developers at gromacs.org
>> http://lists.gromacs.org/mailman/listinfo/gmx-developers
>> Please don't post (un)subscribe requests to the list. Use the 
>> www interface or send it to gmx-developers-request at gromacs.org.
>>   
> _______________________________________________
> gmx-developers mailing list
> gmx-developers at gromacs.org
> http://lists.gromacs.org/mailman/listinfo/gmx-developers
> Please don't post (un)subscribe requests to the list. Use the 
> www interface or send it to gmx-developers-request at gromacs.org.


-- 
David.
________________________________________________________________________
David van der Spoel, PhD, Professor of Biology
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,  	75124 Uppsala, Sweden
phone:	46 18 471 4205		fax: 46 18 511 755
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://folding.bmc.uu.se
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++



More information about the gromacs.org_gmx-developers mailing list