[gmx-developers] bootstrap problems

[Erik Marklund]

David van der Spoel skrev:
> On 2010-06-18 11.25, Erik Marklund wrote:
>> Hi,
>>
>> I get errors or warnings after git pulling the master branch. On a linux
>> system I get:
>>
>> [erikm at anfinsen gromacs]$ ./bootstrap
>> src/ngmx/Makefile.am:41: variable `test_ngmx_dialog_SOURCES' is defined
>> but no program or
>> src/ngmx/Makefile.am:41: library has `test_ngmx_dialog' as canonic name
>> (possible typo)
>
> This is fixed now.
>
> I suspect the stuff below is autoconf misery. Hopefully this will get 
> better with cmake...
>
Thanks. I shoud clarify that nothing was actually errors, just tons of 
warnings. What puzzles me most is that I didn't get this kind of 
warnings before on my mac, yet I am using the same version of automake 
as before (1.11.1).

Erik
>>
>> On my mac I get heaps of other errors all of a sudden:
>> configure.ac:425: warning: AC_CACHE_VAL(ac_o3, ...): suspicious
>> cache-id, must contain _cv_ to be cached
>> ../../lib/autoconf/general.m4:1974: AC_CACHE_VAL is expanded from...
>> ../../lib/autoconf/general.m4:1994: AC_CACHE_CHECK is expanded from...
>> acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from...
>> acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from...
>> configure.ac:425: the top level
>> configure.ac:425: warning: AC_CACHE_VAL(ac_faltivec, ...): suspicious
>> cache-id, must contain _cv_ to be cached
>> configure.ac:425: warning: AC_CACHE_VAL(ac_maltivec, ...): suspicious
>> cache-id, must contain _cv_ to be cached
>> configure.ac:425: warning: AC_CACHE_VAL(ac_mabialtivec, ...): suspicious
>> cache-id, must contain _cv_ to be cached
>> configure.ac:425: warning: AC_CACHE_VAL(ac_fno_schedule_insns, ...):
>> suspicious cache-id, must contain _cv_ to be cached
>> ...
>> the list goes on. It's quite lengthy.
>>
>> Is there something wrong with the current state of the master branch, or
>> is it my systems that are faulty in some way?
>>
>
>


-- 
-----------------------------------------------
Erik Marklund, PhD student
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,    75124 Uppsala, Sweden
phone:    +46 18 471 4537        fax: +46 18 511 755
erikm at xray.bmc.uu.se    http://folding.bmc.uu.se/