[gmx-developers] Re: [gmx-users] Please test the new Gromacs-4.5!

Tsjerk Wassenaar tsjerkw at gmail.com
Thu Sep 2 11:51:38 CEST 2010


Well, never sure with git :p Probably pulled only on master. I think I
got it now.

Thanks

On Thu, Sep 2, 2010 at 11:38 AM, Rossen Apostolov
<rossen.apostolov at cbr.su.se> wrote:
>  Hi Tsjerk,
>
> Are you sure you actually checked out or updated the release-4-5-patches
> branch? It works for me.
>
> Rossen
>
> On 9/2/10 11:17 AM, Tsjerk Wassenaar wrote:
>>
>> Hi Rossen e.a.,
>>
>> Great work! Thanks.
>>
>> I pulled the GIT version today, expecting that release-4-5-patches
>> would now be the final 4.5, but it still welcomes me
>>
>>                           :-)  VERSION 4.5-beta4  (-:
>>
>> Probably I still miss out on the GIT stuff :) Can you enlighten me?
>>
>> Cheers,
>>
>> Tsjerk
>>
>> On Thu, Sep 2, 2010 at 10:51 AM, Rossen Apostolov
>> <rossen.apostolov at cbr.su.se>  wrote:
>>>
>>>  Dear users,
>>>
>>> Gromacs-4.5 is finally out and although all major and critical bugs have
>>> been cleared, we are aware that there are probably many small issues
>>> still
>>> left.
>>>
>>> We would like to ask all users to go ahead and heavy test run the code.
>>> For
>>> example,
>>>
>>> compile on different platforms with different compilers
>>> use different MPI and math libraries
>>> use exclusively the CMake build system. Autoconf *will be removed* after
>>> this release!
>>> try all new features
>>>
>>> Amber and Charmm forcefields
>>> simulated nucleic acids
>>> implicit solvent simulations
>>> Velocity-Verlet integrators, MTTK pressure control and Nose-Hoover chains
>>> Free energy calculations and g_bar
>>>
>>> errors/inconsistencies/typos in the documentation
>>>
>>> If you find any kind of reproducible problems, even minor ones, please
>>> file
>>> a bugzilla report ! We will clear them out as soon as possible. If there
>>> is
>>> no report, we'll assume there is no bug :)
>>>
>>> This test run will be important for distribution package maintainers -
>>> let
>>> us know if you have issues specific to your systems.
>>>
>>> And one more thing - there is a deadline :) We'll try to fix all reports
>>> that are filed in the next two weeks (i.e by Sept. 15)! After that
>>> priority
>>> will be given to development work on major code restructuring towards
>>> 5.0.
>>>
>>> We're awaiting your reports!
>>>
>>> --
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>>
>>
>
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-- 
Tsjerk A. Wassenaar, Ph.D.

post-doctoral researcher
Molecular Dynamics Group
Groningen Institute for Biomolecular Research and Biotechnology /
University of Groningen
The Netherlands



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