[gmx-developers] Any interest in a g(x, y.z) functionality for g_rdf?
chris.neale at utoronto.ca
chris.neale at utoronto.ca
Fri Mar 11 18:59:46 CET 2011
g_spatial does this for a single solute. A bizarre hacking of trjconv
and trjcat with .ndx file reordering could be used to do this with
g_spatial and a final .xtc file that is Nwat*Nframes. Not perfect, but
can be done right now without coding if I understand your interest
correctly.
Chris.
Quoting "Shirts, Michael (mrs5pt)" <mrs5pt at eservices.virginia.edu>:
> Hi, all-
>
> Is there any interest in a g(x,y.z) functionality for g_rdf? For many
> molecules, the liquid structure can be more complicated, and the ability to
> visualize it in three dimensions could be useful. We're looking at this in
> my lab, and were thinking about just writing an easier postprocessing
> script, but if there is more demand for it, we can implement it in Gromacs
> as well.
>
> Best,
> ~~~~~~~~~~~~
> Michael Shirts
> Assistant Professor
> Department of Chemical Engineering
> University of Virginia
> michael.shirts at virginia.edu
> (434)-243-1821
>
> --
> gmx-developers mailing list
> gmx-developers at gromacs.org
> http://lists.gromacs.org/mailman/listinfo/gmx-developers
> Please don't post (un)subscribe requests to the list. Use the
> www interface or send it to gmx-developers-request at gromacs.org.
>
More information about the gromacs.org_gmx-developers
mailing list