[gmx-developers] turn on pdb output after every step.

[santhosh]

This is a cross-post from gmx-users list, as per Justin's reply, this
requires a code change. I want to ask for some pointers or hints on any
utility function which writes the current configuration out and a place to
include that call to utility function. 

I intend to debug md.c tomorrow, any specific function that I should
concentrate on would be immense help. Thanks
Santhosh
Original post in gmx-users:

Hello 

For some reasons, I want to output pdb file output after every step of the
MD run. After searching the forum, I found that Gromacs does that only in
some circumstances(like when the system is about to crash or already
crashed). 
http://gromacs.5086.n6.nabble.com/turn-off-pdb-output-td4417229.html#a4417301

Is there a way I could have a control on that by changing a flag and can I
write only the protein part ignoring the solvent? 
Thanks 
Santhosh 



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