[gmx-developers] Project Ideas

Christoph Junghans junghans at votca.org
Sat Jan 4 01:13:37 CET 2014

2014/1/3 sai hemanth <svshemanth at gmail.com>:
> Hi all,
> I am new to Gromacs and am planning to do my Masters project on Gromacs. I
> have two projects in mind:
> 1.Clustering methods
What kind of clustering methods?
There is already the Spectral Clustering Toolkit
(https://github.com/douradopalmares/mdsctk) and
the Locally-Scaled Diffusion Maps Toolkit
(http://sourceforge.net/projects/lsdmap/) to cluster states.

> 2.Implementing MIC support
> Is anyone working on these topics?
Work in progress: <http://bugzilla.gromacs.org/issues/1187>

> The problem is that I am new to Gromacs and do not personally know any
> expert. So it will be of great help if someone establishes a problem for me.
> I can then go ahead and solve it.
Have a look at <http://redmine.gromacs.org/projects/gromacs/issues>
and find an issue you like to work on.



> Thanks and all the best
> --
> with regards,
> Sai Hemanth S V,
> Masters Student,
> Dept. of Math And Comp.Sci.(DMACS),
> --
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Christoph Junghans
Web: http://www.compphys.de

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