[gmx-developers] Problem with Switch potential
Igor Leontyev
ileontyev at ucdavis.edu
Thu Jul 24 01:10:21 CEST 2014
I have uploaded my input and output files here
http://redmine.gromacs.org/issues/1569
just for the case if somebody want to look at this in greater details.
Igor
-------- Original Message --------
Subject: Problem with Switch potential
Date: Tue, 22 Jul 2014 20:36:35 -0700
From: Igor Leontyev <ileontyev at ucdavis.edu>
To: gmx-developers at gromacs.org
Dear gmx-developers,
Testing with gmx-5.0 different schemes of Long-Range electrostatics for
NMA liquid I noticed unreasonable behavior with "coulombtype=Switch".
Electrostatic energies calculated for the same configuration (i.e. at 0
MD step) with PME and Cut-off coulombtype reasonably agree between each
other. But once I use coulombtype=Switch, the electrostatic energy jumps
by the order of magnitude which is suspicious. See the results bellow.
Any idea what can be wrong ?
Thank you,
Igor
<coulombtype=PME, rcoulomb=1.3>
Coulomb-14 LJ (SR) Disper. corr. Coulomb(SR)+Recipr. Potential
-1.29147e+04 -3.28852e+03 -1.28735e+02 -3.54258e+03 -7.86555e+03
<coulombtype=Cut-off, rcoulomb=1.3>
Coulomb-14 LJ (SR) Disper. corr. Coulomb (SR) Potential
-1.29147e+04 -3.28852e+03 -1.28735e+02 -3.53416e+03 -7.85714e+03
<coulombtype=Switch, rcoulomb=1.3, rcoulomb-switch=1.2>
Coulomb-14 LJ (SR) Disper. corr. Coulomb (SR) Potential
-1.29147e+04 -3.28852e+03 -1.28735e+02 -5.25858e+04 -5.69088e+04
=============================================================
Long-Range block in mdp-file
=============================================================
nstlist = 5 ; update pairlist
rlist = 1.3 ; cut-off for ns
cutoff-scheme = group;
coulombtype = Switch/PME/Cut-off ;
rcoulomb = 1.3 ; cut-off for coulomb
rcoulomb_switch = 1.2 ; switch for coulomb
vdwtype = Cut-off
rvdw = 1.3 ; cut-off for vdw
rvdw_switch = 1.0 ; where to start switching vdw
dispcorr = EnerPres ; LR dispersion corr for En and Pres
;=======================================================================
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