[gmx-developers] Surface tension of bulk water
Berk Hess
hess at kth.se
Fri Aug 7 10:26:33 CEST 2020
Hi,
Please post user questions to the forum:
https://gromacs.bioexcel.eu/c/gromacs-user-forum/
But your problem is that you should simulate a box with
liquid+gas/vacuum phase so it has interfaces, not bulk liquid.
Cheers,
Berk
On 07/08/2020 10.12, Abhinav Srivastava (P14CHM002) wrote:
> Dear Gromacs Users,
>
> I am trying to calculate the surface tension of bulk water. I am using
> TIP4P/2005 water model consisting of 851 water molecules. The box
> dimensions are *3.71233 3.71233 1.85616.*
> Following are the parameters for the mdp file which I am using:
>
> ; OPTIONS FOR WEAK COUPLING ALGORITHMS
> ; Temperature coupling
> ;Tcoupl = no
> Tcoupl = nose-hoover
> tau_t = 2.0
> ref_t = 308
> tc-grps = system
>
> ;Pcoupl = no
>
> Pcoupl = Berendsen
> tau_p = 2.0
> pcoupltype = isotropic
> ref_p = 1
> compressibility = 5e-5
>
> I am using *#Surf*SurfTen* option in the g_energy command in
> GROMACS-4.6.5. I have calculated surface tension for 70 ns NPT run.
> Following is the output which I am getting:
>
> Statistics over 35000001 steps [ 0.0000 through 70000.0000 ps ], 1
> data sets
> All statistics are over 350001 points
>
> Energy Average Err.Est. RMSD Tot-Drift
> -------------------------------------------------------------------------------
> #Surf*SurfTen -3.53622 2.6 1336.67 0.561131
> (bar nm)
>
>
> The value for surface tension of bulk water at 308 K is 70.38 dyn/cm.
>
>
> Kindly tell me whether I am giving some wrong input parameters?
>
>
> Regards,
>
>
> --
> *Abhinav Srivastava*
> /Research Scholar/
> Indian Institute of Technology, Jodhpur
> Rajasthan
>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-developers/attachments/20200807/30d912e8/attachment.html>
More information about the gromacs.org_gmx-developers
mailing list