[gmx-users] why do I have a "pressure scaling more than 1%" warning?
David van der Spoel
spoel at xray.bmc.uu.se
Thu Dec 13 21:01:05 CET 2001
On Thu, 13 Dec 2001 nicolis at guideo.fr wrote:
>Tcoupl = berendsen
>tc-grps = TLF SOL
>tau_t = 0.1 0.1
>ref_t = 300 300
>Pcoupl = berendsen
>Pcoupltype = isotropic
>tau_p = 0.5
>compressibility = 4.5e-5
>ref_p = 1.0
>
>I tried to begin with or without initial velocities but it makes no difference.
>Is it a serious problem? And how to avoid it?
It means your pressure coupling is too fast. Increase the tau_p to at
least 1 ps.
Groeten, David.
________________________________________________________________________
Dr. David van der Spoel, Biomedical center, Dept. of Biochemistry
Husargatan 3, Box 576, 75123 Uppsala, Sweden
phone: 46 18 471 4205 fax: 46 18 511 755
spoel at xray.bmc.uu.se spoel at gromacs.org http://zorn.bmc.uu.se/~spoel
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