[gmx-users] coordinates, topology and PRODRG

[Lars Poulsen]

Dear all,

Are there any other tools out there for converting pdb coordinates to gromacs coordinates and creating topologies than the PRODRG server?

The PRODRG server is great, but since I would like to convert and create topologies for large polymer systems, I can't really limit myself to the 100 atoms allowed.

Any suggestions?

Best regards,
Lars Poulsen
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Lars Poulsen
Dept. of Chemistry, University of Aarhus
Langelandsgade 140, DK-8000 Aarhus C
Phone: +45 8942 3871
Fax: +45 8619 6199
email: lpoulsen at chem.au.dk
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