[gmx-users] INTRA-molecular disulphide bridges.
k.a.feenstra at chem.rug.nl
Mon Nov 26 11:36:19 CET 2001
Leonardo Manzoni wrote:
> Hi all,
> I have to simulate a small cyclic peptide with a disulphide bridge in it,
> formed by two residues belonging to the same chain.
> It looks like pdb2gmx can form disulphide bridges only between different
> chains. Is there a way to form the disulphide bridge INTRA-molecularly?
It is exactly the opposite: pdb2gmx can *not* make inter-molecular
(between different chains) bonds. I would guess something else goes
| | Anton Feenstra Dept. of Biophysical Chemistry |
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