[gmx-users] PME/Ewald
Andrew Horsfield
horsfield at fecit.co.uk
Mon Oct 22 11:42:30 CEST 2001
> To check quickly whether it is the charge you can ofcourse replace 12
> solvents by Na+ (using genion).
I have tried including 12 Na+ ions. The warning about the charges
disappeared, but the PME mesh still failed.
I have had success with PME with a charged small cell without solvent.
Thus the problem is not the charge.
Maybe there is some problem with my input file. It contains:
; OPTIONS FOR ELECTROSTATICS AND VDW =
; Method for doing electrostatics =
coulombtype = PME
rcoulomb-switch = 0
rcoulomb = 1.0
; Dielectric constant (DC) for cut-off or DC of reaction field =
epsilon-r = 1
; Method for doing Van der Waals =
vdw-type = Cut-off
; cut-off lengths =
rvdw-switch = 0
rvdw = 1.0
; Apply long range dispersion corrections for Energy and Pressure =
DispCorr = No
; Spacing for the PME/PPPM FFT grid =
fourierspacing = 0.2
; FFT grid size, when a value is 0 fourierspacing will be used =
fourier_nx = 0
fourier_ny = 0
fourier_nz = 0
; EWALD/PME/PPPM parameters =
pme_order = 4
ewald_rtol = 1e-05
epsilon_surface = 0
optimize_fft = no
Cheers,
Andrew
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