[gmx-users] visualization

[Nguyen Hoang Phuong]

Hi All,

I would like to visualize the *.gro file using VMD. It usually works
fine. However, for the below gro file, it displays a strange object:

Generated by trjconv : Protein in water t=  80.00000
 6
  777SOL   OW 2342   0.872   1.209   0.985
  777SOL  HW1 2343   0.931   1.229   0.906
  777SOL  HW2 2344   0.857   1.110   0.990
  777SOL   OW 2342   0.872   1.209   0.985
  777SOL  HW1 2343   0.931   1.229   0.906
  777SOL  HW2 2344   0.857   1.110   0.990
   3.01669   3.01669   3.01669
Generated by trjconv : Protein in water t=  80.00200
 6
   86SOL   OW  269   0.871   1.583   0.908
   86SOL  HW1  270   0.779   1.621   0.906
   86SOL  HW2  271   0.937   1.655   0.927
  777SOL   OW 2342   0.874   1.207   0.985
  777SOL  HW1 2343   0.932   1.228   0.906
  777SOL  HW2 2344   0.861   1.109   0.992
   3.01669   3.01669   3.01669

Can anyone explain it for me? Thanks

Phuong
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