[gmx-users] mpirun on lam

David van der Spoel spoel at xray.bmc.uu.se
Wed Apr 17 00:11:06 CEST 2002


On Tue, 16 Apr 2002, Y U Sasidhar wrote:

>1) I have run grompp with -suffle and -np 16 options
>2) mpirun -np 16 mdrun_mpi -- -v -s full.tpr -e full.edr -o full.trr -c
>after_full.gro -g full.log >& full.job &
>
>running 1 and 2 results in:
>mpirun: cannot start mdrun_mpi on n1: No such file or directory

Have you run lamboot?
Otherwise, the option should be mpirun -c 16


-- 
Groeten, David.
________________________________________________________________________
Dr. David van der Spoel, 	Biomedical center, Dept. of Biochemistry
Husargatan 3, Box 576,  	75123 Uppsala, Sweden
phone:	46 18 471 4205		fax: 46 18 511 755
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://zorn.bmc.uu.se/~spoel
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