[gmx-users] Rotation of CoM: paralel version
David van der Spoel
spoel at xray.bmc.uu.se
Wed Apr 17 05:21:10 CEST 2002
On Tue, 16 Apr 2002, Mehmet Suezen wrote:
>'thermostat' runs.
>How could I test it? Or be sure that it is so. I guess just comparing
>input
>and output angular momentum of CoM?
check your mdout.mdp file
comtype = angular
g_traj lets you compute kinetic energy of rotation and translation from
the trajectory
--
Groeten, David.
________________________________________________________________________
Dr. David van der Spoel, Biomedical center, Dept. of Biochemistry
Husargatan 3, Box 576, 75123 Uppsala, Sweden
phone: 46 18 471 4205 fax: 46 18 511 755
spoel at xray.bmc.uu.se spoel at gromacs.org http://zorn.bmc.uu.se/~spoel
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