[gmx-users] jumps through the box

[Dmitry Kovalsky]

Hi 

My protein consists of two chains and when I perform long simulation and it 
moves toward box edge one subunit begans jumping.

 I have tried like  here was suggested 
http://www.gromacs.org/pipermail/gmx-users/2002-June/001899.html
This helps but only in part: the two monomers are "reconnected" but now the 
whole protein jumps.


Is there a full desision of the problem?

-- 
Sincerely yours,

Ph.D. Student Dmitry Kovalsky
Institute of Molecular Biology & Genetics
150 Akad. Zabolotnogo Street,
Kiev-143, 03143
UKRAINE

E-mail: dikov at imbg.org.ua
Fax:  +380 (44) 266-0759
Tel.: +380 (44) 266-5589