[gmx-users] jumps through the box

Dmitry Kovalsky dikov at imbg.org.ua
Tue Dec 10 19:22:25 CET 2002


My protein consists of two chains and when I perform long simulation and it 
moves toward box edge one subunit begans jumping.

 I have tried like  here was suggested 
This helps but only in part: the two monomers are "reconnected" but now the 
whole protein jumps.

Is there a full desision of the problem?

Sincerely yours,

Ph.D. Student Dmitry Kovalsky
Institute of Molecular Biology & Genetics
150 Akad. Zabolotnogo Street,
Kiev-143, 03143

E-mail: dikov at imbg.org.ua
Fax:  +380 (44) 266-0759
Tel.: +380 (44) 266-5589

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