[gmx-users] Bug in g_rms -> calculate RhoSc ??
Anton Feenstra
feenstra at chem.vu.nl
Tue Dec 17 13:46:37 CET 2002
Marcin Wojciechowski wrote:
>
> I havent't tried that, but if we speak about possible bug in g_rms
> then i've experienced problems with -skip option. I had a 1ns xtc
> trajectory file with 1ps writing frequency and wanted to take structures
> to compare every 10ps. G_rms was ignoring the -skip settings and keeping
> comparing every step. I had to use trjconv first, generate "skipped xtc"
> and then run g_rms.
>
> Could it be a bug in the code?
-skip is only used when generating rms matrices.
--
Groetjes,
Anton
________ ___________________________________________________________
| | Anton Feenstra |
| . | Dept. of Pharmacochemistry - Vrije Universiteit Amsterdam |
| |---- | De Boelelaan 1083 - 1081 HV Amsterdam - The Netherlands |
| |---- | Tel: +31 20 44 47608 - Fax: +31 20 44 47610 |
| ' __ | Feenstra at chem.vu.nl - http://www.chem.vu.nl/afdelingen/FAR|
| / \ |-----------------------------------------------------------|
| ( ) | Dept. of Biophysical Chemistry - University of Groningen |
| \__/ | Nijenborgh 4 - 9747 AG Groningen - The Netherlands |
| __ | Tel +31 50 363 4327 - Fax +31 50 363 4800 |
| / \ | K.A.Feenstra at chem.rug.nl - http://md.chem.rug.nl/~anton |
| ( ) |-----------------------------------------------------------|
| \__/ | "It's Because Of the Metric System" (Pulp Fiction) |
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