[gmx-users] Calculation of LJ potential

sadhna sadhana at che.iitb.ac.in
Sun Mar 3 18:49:00 CET 2002

Dear Sir,
          I would like to know how LJ potential is calculated in Gromacs.
Does the LJ  function exclude the first, second and third bonded 
neighbours of a  particular atom or does it calculate the potential
between all atoms without bothering about the bond connectivity.



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