[gmx-users] Installation of Vers. 3.1.3 on IBM RS/6000

[Rainer Boeckmann]

thanks! --disable-largefile helps indeed!
rainer

 Lindahl wrote:

> Rainer Boeckmann wrote:
>
> >hi,
> >
> >trying to compile the GROMACS 3.1.3 version (MPI version) on an IBM RS/6000
> >(type pS 690, "Regatta") I get the following error messages:
> >
> >"mpcc -DHAVE_CONFIG_H -I. -I. -I../../src -I../../include
> >-DGMXLIBDIR=\"/usr/users/rboeckm/bin/g81/share/gromacs/top\"
> >-I/usr/users/rboeckm/bin/fftw/include -O3 -qarch=pwr3 -qtune=pwr3 -qmaxmem=16384
> >-c -M 3dview.c
> >"/usr/include/stdio.h", line 434.12: 1506-343 (S) Redeclaration of fgetpos64
> >differs from previous declaration on line 274 of "/usr/include/stdio.h".
> >"/usr/include/stdio.h", line 434.12: 1506-377 (I) The type "long long*" of
> >parameter 2 differs from the previous type "long*".
> >...
> >..."
> >
> >and so on. Does anyone know a solution?
> >
> Sounds like an internal inconsistency in the IBM include files:
> apparently the definition of fgetpos64
> don't agree on lines 274 and 434 of stdio.h. Complain!
>
> To compile Gromacs in the meantime you could try and disable largefile
> (>2GB) support with
> the --disable-largefile option to configure.
>
> Cheers,
>
> Erik

--
Rainer Böckmann
Max-Planck-Institute for Biophysical Chemistry
Theoretical Molecular Biophysics Group
Am Fassberg 11
D-37077 Göttingen, Germany
Tel.: +49(551)201-1141,  Fax.: +49(551)201-1089
email: rboeckm at gwdg.de