[gmx-users] Charge groups II
Anton Feenstra
feenstra at chem.vu.nl
Thu May 16 15:18:12 CEST 2002
Pedro Alexandre de Araujo Gomes Lapido Loureiro wrote:
>
> Dear David,
>
> In fact I have made a mistake: I meant charge groups and not charged groups!
> My question was: should I use charge groups with PME calculations?
Why would you not use them? There is no direct option to switch
them off in the Gromacs code; it would require you to manually
adjust the chargegroup definitions in your topology file(s)...
Having said that, it does seem that in PME, where there is no real
cut-off from interaction to nothing, the notion of using chargegroups
seems superfluous...
--
Groetjes,
Anton
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| | Anton Feenstra |
| . | Dept. of Pharmacochemistry - Free University Amsterdam |
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