[gmx-users] PDB file problems

Senthil Kandasamy senthilk at engin.umich.edu
Mon May 20 16:31:34 CEST 2002

I have a pdb file generated by CHARMM. The protein has 25 aminoacids and 
I get the following error when I do pdb2gmx

Fatal Error:
Atom OT1 in residue GLY 25 not found in rtp database while sorting atoms.

OT1 is the C-terminal oxygen.
How do I fix this?



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