[gmx-users] anisotropic B
David van der Spoel
spoel at xray.bmc.uu.se
Wed May 22 17:54:48 CEST 2002
On Tue, 21 May 2002 rams at poori.biochem.uiowa.edu wrote:
> g_rmsf -aniso -f 1ns_nr.trr -s 1ns_nr.tpr -oq aniso.pdb
>
>I get isotropic B's - no ANISOU card in the output pdb file.
>More surprisingly the iso-B's are different than when I dont use the aniso
>card.
You can also pass a pdb file with input Uij, and the program will do a
correlation.
Otherwise there could be an error in the program. I typed it in from Jan
Drenth I think...
Groeten, David.
________________________________________________________________________
Dr. David van der Spoel, Biomedical center, Dept. of Biochemistry
Husargatan 3, Box 576, 75123 Uppsala, Sweden
phone: 46 18 471 4205 fax: 46 18 511 755
spoel at xray.bmc.uu.se spoel at gromacs.org http://zorn.bmc.uu.se/~spoel
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