[gmx-users] A problem about the simulation of lipid bilayer!
lindahl at stanford.edu
Sun Nov 17 18:43:14 CET 2002
yong pei wrote:
> How can I select the parameters for the side chain
>of the lipid molecules? I have check in the .itp and
>.atp etc. files,but I was confuse about which
>parameter is proper for the long side chain .
> Can you tell me ?
> best regards,
> yong pei
Lipids aren't polymers like proteins, so you'll have to create a special
rtp entry for every sort of lipid. Some of them are already present in
files, but most people simulating lipids prefer to use specially tuned
(check the literature), since the normal ones are usually tailored for
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