[gmx-users] opls & TIP4P
Graham Smith
smithgr at cancer.org.uk
Fri Oct 18 18:58:41 CEST 2002
> now the grompp complains: " dummy atom MW (Res SOL-294) has
> non-zero mass 4.026,will be set to zero" .... what about LP, whose
> atom mass is 4.026 in ffoplsaanb.itp; that has atom type opls_115 as
> also MW in tip4gmx.itp. Could there be something mixing up?
Oh yes, sorry, you're quite right - I think you have to change the
two opls_115 lines in ffoplsaanb.itp to
opls_115 LP 0.00000 -1.040 A 0.00000e+00
0.00000e+00
I did it in both parts of the ifdef HEAVY_H, though I dont' think (?)
you would want to combine opls with heavy_h anyway.
(when I looked at my files I had changed it and then forgotten about
it - lucky emacs makes those *~ files)
########################################################################
Dr. Graham R. Smith, Department of Biological Sciences,
Biomolecular Modelling Laboratory, Biochemistry Building,
Cancer Research UK, Imperial College of Science,
44 Lincoln's Inn Fields, Technology & Medicine,
London WC2A 3PX, London SW7 2AZ,
U.K. U.K.
Tel: +44-(0)20 7269 3348 Tel: +44-(0)20 7594 5737
email: graham.smith at cancer.org.uk
URL: http://www.bmm.icnet.uk/~smithgr
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