[gmx-users] Checking files .xtc .trr .edr

Xavier Periole periole at inka.mssm.edu
Tue Oct 29 18:31:55 CET 2002

on 10/29/02 11:54 AM, Alan Wilter Sousa da Silva at alan at biof.ufrj.br wrote:

> Hi List!
> I run GMX in a cluster and some processors write files via NFS.
> However, the NFS server crashed, stoped for a while and then was rebooted.
> How could I be sure whether my .xtc .trr and .edr files was, or not,
> corrupted?  I kept the jobs running.
> Many thanks in advance,
> Cheers,

You can try the gmxcheck for the trajectories
and a g_energy for the energy files. If there is
corruption the program will comlain.


> -----------------------
> Alan Wilter S. da Silva
> -----------------------
> Laboratório de Física Biológica
> Instituto de Biofísica Carlos Chagas Filho
> Universidade do Brasil/UFRJ
> Rio de Janeiro, Brasil
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