[gmx-users] .xtc stopped
David
spoel at xray.bmc.uu.se
Mon Sep 16 22:00:11 CEST 2002
On Mon, 2002-09-16 at 17:38, ehab at biof.ufrj.br wrote:
>
> Hi,
>
> I'm running MD of proteins immersed in water with inhibitor during
> 1000ps...most of them (10 simulations) were fine, but one of that stopped to
> write the xtc archive at 834 ps.The trr and out shows that the simulation
> finished at 1000ps..Anyone could help me to say what happened
Disk full? xtc size > 2 Gb? Running on sick hardware (e.g. memory
problems)? Is the energy also running until 10000 ps?
> Thanks in advance,
>
> Elza Helena Andrade Barbosa
> Biophysics Institute Carlos Chagas Filho
> Federal University of Rio de Janeiro
> Brazil
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--
Groeten, David.
________________________________________________________________________
Dr. David van der Spoel, Biomedical center, Dept. of Biochemistry
Husargatan 3, Box 576, 75123 Uppsala, Sweden
phone: 46 18 471 4205 fax: 46 18 511 755
spoel at xray.bmc.uu.se spoel at gromacs.org http://zorn.bmc.uu.se/~spoel
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