[gmx-users] oscillations in pressure (NPT)
Valentin Gogonea
v.gogonea at csuohio.edu
Thu Sep 19 01:10:46 CEST 2002
Dear Gromacs users,
I tried to run a NPT simulation (100 ps) of one of the demo examples
that come with gromacs distribution (cpeptide in share/tutor/gmxdemo/).
I got large oscillations of the pressure, I searched the mailing list
and following the suggestions given in an earlier discussion I
increased the tau_p from 0.5 to 2.0 and than 5.0 without success.
I used the Berendsen barostat (I included the md.mdp file)
I would appreciate if anybody can provide some advice of what to do to
remove these pressure oscillations. I included here the pres.xvg files
obtained with the g_energy program for the three simulations.
Thank you.
Valentin
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