[gmx-users] parallel with network

David spoel at xray.bmc.uu.se
Thu Sep 19 16:41:37 CEST 2002


On Thu, 2002-09-19 at 16:00, mojtaba alaei wrote:
> Dear All
> 
> I want to use parallel mdrun.
> In our lab,There are tow server(one of them have four processor intel 1.7 G 
> and another tow processor intel 1.7 G)and six PC pIII or PC pIV .
> Our system is linux redhat 7.3 and all of computers in the lab are connected 
> with each other with network.
> We label the computers whit node1(server),node2,node3,...
> Can I make parallel these computer and use parallel mdrun?
Yes,

I suggest you look at the examples on the LAM website
http://www.lam-mpi.org
> What should I do?I know about parallel less.
> (really,before I install gromas for parallel and in  the install
> there isn't any errors,and parallel mdrun with option -np 3,4,..worked,but
> only one processor worked)
> 
> 
> My another E-mail:s8026264 at sepahan.iut.ac.ir
> 
> Sincerely yours
> 
> Mojtaba
> 
> 
> 
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-- 
Groeten, David.
________________________________________________________________________
Dr. David van der Spoel, 	Biomedical center, Dept. of Biochemistry
Husargatan 3, Box 576,  	75123 Uppsala, Sweden
phone:	46 18 471 4205		fax: 46 18 511 755
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://zorn.bmc.uu.se/~spoel
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