[gmx-users] parallel question!!!

PeiQuan Chen gromacs at 163.com
Mon Apr 7 02:26:01 CEST 2003


Dear gmx-users:

I want to do a parallel calucation now.But The following accur. Why???

step 18690, will finish at Tue Apr  8 03:01:57 2003
step 18700, will finish at Tue Apr  8 03:01:21 2003
step 18710, will finish at Tue Apr  8 03:00:46 2003
step 18720, will finish at Tue Apr  8 03:00:10 2003
Fatal error: ind = 311 should be in 0 .. 299 [FILE nsgrid.c, LINE 256]
Error on node 1, will try to stop all the nodes
[1] MPI Abort by user Aborting program !
[1] Aborting program!
    p4_error: latest msg from perror: Invalid argument
p1_10314:  p4_error: : -1
p2_10324:  p4_error: net_recv read:  probable EOF on socket: 1
p0_10310:  p4_error: net_recv read:  probable EOF on socket: 1
/usr/local/mpich-icc/bin/mpirun: line 1: 10310 Broken pipe             /home/pqchen/gromacs/i686-pc-linux-gnu/bin/mdrun "-s" "mecn_box.tpr" "-o" "mecn_box.trr" "-c" "mecn_boxeq.gro" "-v" "-g" "md.log" -p4pg /home/pqchen/MeCN/PI10188 -p4wd /home/pqchen/MeCN

Sincerely yours
---- 
PeiQuan Chen
________________________________________________________________________
PeiQuan Chen 	Department of Chemistry, Nankai University
WeiJin Road 94, TianJin, 300071, P.R.China
phone:	(86)2223506728		Mobile Phone: (+86)13920675030
gromacs at 163.com	
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