[gmx-users] NMA

[Ruben Martinez Buey]

Hi all,
I am trying to energy minimize my protein+ligand (5000 atoms) for a
further NMA. Anyway, if the Fmax must be < 0.0001, it´s very slow and it
never ends on my single processor Silicon workstation... Is there any
way to make it faster?
Thanks a lot for your attention,
with best regards,
Ruben


--
___________________________________________

Rubén Martínez-Buey. PhD student
Protein Function and Structure Dept. Lab. 352
Centro de Investigaciones Biológicas (CIB-CSIC)
C/ Velázquez, 144,  28006  MADRID (SPAIN)
Tlf: +34-91-561 18 00 ext. 4380
Fax: +34-91-562 75 18


-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20030408/26a15f26/attachment.html>