[gmx-users] problem with porting excutables to another site (IBM AIX)

[David]

On Sun, 2003-04-20 at 06:43, Erik Lindahl wrote:
> <excerpt><smaller>
> 
> </smaller></excerpt>Hi,
> 
> 
> <excerpt><smaller>I am having trouble when trying to port the compiled
> gromacs excutables to another site (a remote site). I changed PATHs in
> 
> GMXRC and GMARC.bash etc to proper new localtions, and the program
> pdb2gmx found the right location for top lib files, and it ran.
> 
> However, it core dumps at the end:
> 
> 
> </smaller></excerpt>Actually, in most cases you shouldn't even have to
> do that; the binaries look in places like ../../share/top and can
> almost always find the topology stuff automatically if you move the
> whole tree. The GMXRC files are mainly intended to provide option and
> filename completion.
> 
> 
> <excerpt><smaller>Back Off! I just backed up 1a45.top to ./#1a45.top.3#
> 
> Processing chain 1 (1481 atoms, 173 residues)
> 
> Opening library file
> /dfs/protein/programs/gromacs/share/top/specbond.dat
> 
> 5 out of 5 lines of specbond.dat converted succesfully
> 
> Illegal instruction (core dumped)
> 

> 
If you compile for power4 and run on power2 you'll get this problem.


-- 
Groeten, David.
________________________________________________________________________
Dr. David van der Spoel, 	Dept. of Cell and Molecular Biology
Husargatan 3, Box 596,  	75124 Uppsala, Sweden
phone:	46 18 471 4205		fax: 46 18 511 755
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://xray.bmc.uu.se/~spoel
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