[gmx-users] changing dihedral angles in a pdb file

K.A. Feenstra feenstra at chem.vu.nl
Mon Apr 21 20:28:01 CEST 2003


Y U Sasidhar wrote:
 > Is there a utility which will read a pdb file, change certain selected
 > phi,si,chi1, chi2 etc to specific values and write the changed pdb file
 > ? spdbv ( deep view ) has a tortion tool but it doesn't display the
 > angle being varied. It becomes difficult, though not impossible to set
 > specific torsion values.

There is a version of rasmol that can select and modify bonds, angles
and dihedrals. Don't know straight way where & how to get it, though
(try e.g. google, it shouldn't be too hard to find).


-- 
Groetjes,

Anton
  _____________ _______________________________________________________
|             |                                                       |
|  _   _  ___,| K. Anton Feenstra                                     |
| / \ / \'| | | Dept. of Pharmacochem. - Vrije Universiteit Amsterdam |
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