[gmx-users] changing dihedral angles in a pdb file
K.A. Feenstra
feenstra at chem.vu.nl
Mon Apr 21 20:28:01 CEST 2003
Y U Sasidhar wrote:
> Is there a utility which will read a pdb file, change certain selected
> phi,si,chi1, chi2 etc to specific values and write the changed pdb file
> ? spdbv ( deep view ) has a tortion tool but it doesn't display the
> angle being varied. It becomes difficult, though not impossible to set
> specific torsion values.
There is a version of rasmol that can select and modify bonds, angles
and dihedrals. Don't know straight way where & how to get it, though
(try e.g. google, it shouldn't be too hard to find).
--
Groetjes,
Anton
_____________ _______________________________________________________
| | |
| _ _ ___,| K. Anton Feenstra |
| / \ / \'| | | Dept. of Pharmacochem. - Vrije Universiteit Amsterdam |
|( | )| | | De Boelelaan 1083 - 1081 HV Amsterdam - Netherlands |
| \_/ \_/ | | | Tel: +31 20 44 47608 - Fax: +31 20 44 47610 |
| | Feenstra at chem.vu.nl - www.chem.vu.nl/~feenstra/ |
| | "If You See Me Getting High, Knock Me Down" |
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