[gmx-users] RE: Drug - Enzyme tutorial (Dastmalchi)

[Ing. Vojtěch Spiwok]

> Dear Collegues,
> 
> I am new to GROMACS, and was going through the Drug-Enzyme tutorial. I
> am using CROMACS on a PC running WinXP. When I issue the following 
> command "genbox -cp trp.gro -cs spc216.gro -o trp_b4em.gro -p trp.top", 
> I get an empty trp.top file. I tried to edit the top file using temp.top 
> and did many other thing to continue the tutorial but it didn't work. I 
> was wondering if you could kindly help me out with this.
> 
> Cheers, Siavoush
Dear Siavoush
It must be bug or compiling error. Delete the empty trp.top file and rename
temp.top (or whatever is the name of the top file created by genbox) to
trp.top and it should work. Or instal Linux on your machine.

Sincerely
Vojtech Spiwok
ICT Prague