[gmx-users] Clustermatic

Jason DeJoannis jdejoan at emory.edu
Tue Aug 5 21:56:01 CEST 2003

Dear All, 
 Does anyone have experience installing Clustermatic? 
If so did you encounter any hitches when using Gromacs? 
Our 9-node cluster currently uses Scyld Beowulf and  
Redhat 7. PME doesn't work in parallel. I have tested 
the bproc version of mpich that is installed and it works 
fine for the calculation of Pi.  
  I would like to install Redhat 8 with Clustermatic 3  
to make the system more up-to-date. Redhat 8 has the new  
glibc, which is important. Lots of things don't work with  
the older glibc - such as the recent edition of LAM which  
has bproc support. 
 From searching the mailing list it seems to me that there 
is very little mention of Beowulf/bproc clusters. Does 
that mean that most of you are using clusters with RSH  
and independent nodes? 
Jason de Joannis, Ph.D. 
Chemistry Department, Emory University 
1515 Pierce Dr. NE, Atlanta, GA 30322 
Phone: (404) 712-2983 
Email: jdejoan at emory.edu 

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