[gmx-users] Generating Topology File

[Ilya Chorny]

I have generated a topology file for the molecule I am interested in
studying using PRODRG. How do I then specify which forcefield to use. I
would like to use OPLS. The Molecule is CH3-(CH2)x-NH3+.

Thanks

Ilya
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Ilya Chorny Ph.D.         Department of Pharmaceutical Chemistry
Postdoctoral Researcher   University of California-San Francisco
phone: (408)-887-8496     Genentech Hall 600 16th St Box 2240
fax: (415)502-1411        San Francisco, Ca, 94107
            email: ichorny at maxwell.ucsc.edu
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