[gmx-users] Visualizing Gromacs trajectories with InsightII

[Anton Feenstra]

Anu Tervo wrote:
> Dear all,
> 
> does anyone know how to visualize Gromacs trajectories with InsightII?
> When using Gromacs version 2.0, the thing goes something like:
> 
> trjconv -f trajectory.tpb -o trajectory.g87 -nog87box
> gtoarc1 system.gro trajectory.g87 trajectory.arc 
> 
> but it would be nice to visualize trajectories of newer gromacs versions
> as well (currently I'm using Gromacs 3.0.3 but it will be updated soon).
> It seems that gtoarc1 has been removed from version 3.0 -> so if someone
> knows any other way to generate Insight .arc file it would be nice to
> know!

gtoarc1 is not a gromacs tool.


-- 
Groetjes,

Anton
  _____________ _______________________________________________________
|             |                                                       |
|  _   _  ___,| K. Anton Feenstra                                     |
| / \ / \'| | | Dept. of Pharmacochem. - Vrije Universiteit Amsterdam |
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| \_/ \_/ | | | Tel: +31 20 44 47608 - Fax: +31 20 44 47610           |
|             | Feenstra at chem.vu.nl - www.chem.vu.nl/~feenstra/       |
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