[gmx-users] Strange solvation error

[Anton Feenstra]

Raj Badhan wrote:

> Dear users,
> I have a strange error for you. Whilst solvating my dimer with 
> ligand, I get the following error:
[...]
> Will generate new solvent configuration of 3896x1x1 boxes
> Generating configuration
[...]

Here genbox tells you it will stack 3896 boxes of 'spc216' in a row!
That seems like a pretty strange box-shape to me. What are the
dimensions of the box in your 'solute' file (.gro or .pdb)?


-- 
Groetjes,

Anton
  _____________ _______________________________________________________
|             |                                                       |
|  _   _  ___,| K. Anton Feenstra                                     |
| / \ / \'| | | Dept. of Pharmacochem. - Vrije Universiteit Amsterdam |
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