[gmx-users] DAvid, continuous with the problem of the Na.

David spoel at xray.bmc.uu.se
Sun Dec 7 21:45:01 CET 2003


On Sun, 2003-12-07 at 17:50, Mauricio Arenas Salinas wrote:
>    In my file ion_.gro appears the atomos of Na, that it 
> generates using "genion", but after doing a EM the atomos 
> of Na disappear of ion_em.gro, what I can do?.

have you used the new file in combination with a (manually) updated
topology?

> 
> 
>   thank you very much.
>    greetings from Chile
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-- 
David.
________________________________________________________________________
David van der Spoel, PhD, Assist. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,  	75124 Uppsala, Sweden
phone:	46 18 471 4205		fax: 46 18 511 755
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://xray.bmc.uu.se/~spoel
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