[gmx-users] octahedron box (fwd)

David van der Spoel spoel at xray.bmc.uu.se
Sat Dec 20 10:26:01 CET 2003

---------- Forwarded message ----------
Date: Fri, 19 Dec 2003 22:45:27 -0500
From: Simon Wang <sim_wang03 at hotmail.com>
To: spoel at xray.bmc.uu.se
Subject: octahedron box

Hi, Dr. David van der Spoel:

How are you. I currently am using GROMACS 3.1.4 to set up some membrane 
lipid simulation. The problem I have is to build the octadron box. The box 
is always viewed like a rectangular box. I searched the mailing list archive 
and found your suggestion to use 'trjconv -ur compact'. Apparently it still 
doesn't work for my case. Your valuable suggestions will be highly 

Thanks in advance,

Simon Wang

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