[gmx-users] Re: (no subject) (g_chi and transition times)

[Alan Wilter Sousa da Silva]

Hi Graham!

On Wed, 5 Feb 2003, Graham Smith wrote:

> move the tar file to the src/tools directory, extract it
> with tar -xvPf newchi_sep02.tar, remove (or rename) pp2shift.h (ie the
> old version in src/tools, not the new version which should be in
> include), make g_chi

Tried that with GMX 3.1.4 and I got erros.

/bin/sh ../../libtool --mode=link cc  -O6 -fomit-frame-pointer
-finline-functions -Wall -Wno-unused -malign-double -funroll-all-loops
-o g_chi  g_chi.o anadih.o pp2shift.o dlist.o autocorr.o expfit.o
polynomials.o levenmar.o ../mdlib/libmd.la ../gmxlib/libgmx.la -lnsl -lnsl
-lsrfftw -lsfftw -lm
libtool: link: warning: library `/usr/local/lib/libsrfftw.la' was moved.
libtool: link: warning: library `/usr/local/lib/libsfftw.la' was moved.
libtool: link: warning: library `/usr/local/lib/libsrfftw.la' was moved.
libtool: link: warning: library `/usr/local/lib/libsfftw.la' was moved.
cc -O6 -fomit-frame-pointer -finline-functions -Wall -Wno-unused
-malign-double -funroll-all-loops -o g_chi g_chi.o anadih.o pp2shift.o
dlist.o autocorr.o expfit.o polynomials.o levenmar.o
../mdlib/.libs/libmd.a ../gmxlib/.libs/libgmx.a -lnsl
/usr/local/lib/libsrfftw.so /usr/local/lib/libsfftw.so -lm -Wl,--rpath
-Wl,/usr/local/lib -Wl,--rpath -Wl,/usr/local/lib
g_chi.o: In function `do_dihcorr':
g_chi.o(.text+0x60f): undefined reference to `print_one'
g_chi.o(.text+0x661): undefined reference to `print_one'
g_chi.o(.text+0x6a6): undefined reference to `print_one'
g_chi.o(.text+0x6f1): undefined reference to `print_one'
g_chi.o(.text+0x72d): undefined reference to `print_one'
g_chi.o(.text+0x76b): more undefined references to `print_one' follow
g_chi.o: In function `main':
g_chi.o(.text+0x64d3): undefined reference to `mk_multiplicity_lookup'
g_chi.o(.text+0x65e2): undefined reference to `low_ana_dih_trans'
g_chi.o(.text+0x6c3d): undefined reference to `mk_chi_lookup'
g_chi.o(.text+0x6cab): undefined reference to `get_chi_product_traj'
collect2: ld returned 1 exit status
make: ** [g_chi] Erro 1

Should I have to use the newst CVS version?

TIA,
Cheers,

-----------------------
Alan Wilter S. da Silva
-----------------------
 Laboratório de Física Biológica
  Instituto de Biofísica Carlos Chagas Filho
   Universidade do Brasil/UFRJ
    Rio de Janeiro, Brasil