[gmx-users] strange bihavior.

[Andrey V Golovin]

Hello Anton,

Thursday, February 6, 2003, 8:20:43 PM, you wrote:


AF> Or maybe you have generated lipid molecules on top of each other; have
AF> you tried minimizing the lipids before genbox. That is not a necessary
AF> step, but it *will* tell you if the conflict is there already.

Yes I did it in vacuum Epot was about 600 and I did 1 ns MD... so i
suppose lipids mixture is OK. Problem is genbox. I supose that David
was right it's PBC. But simple pbc=no does not work...



-- 
Best regards,
 Andrey   Golovin                         mailto:golovin at genebee.msu.su